Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SRP9P49458 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.84□□□□□ -0.19
SRP9P49458 AC097376.2-205ENST00000610159 5334 ntBASIC13.83□□□□□ -0.19
SRP9P49458 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.83□□□□□ -0.19
SRP9P49458 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.83□□□□□ -0.19
SRP9P49458 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SRP9P49458 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SRP9P49458 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SRP9P49458 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SRP9P49458 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
SRP9P49458 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.83□□□□□ -0.2
SRP9P49458 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SRP9P49458 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.83□□□□□ -0.2
SRP9P49458 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.83□□□□□ -0.2
SRP9P49458 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.83□□□□□ -0.2
SRP9P49458 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.83□□□□□ -0.2
SRP9P49458 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.83□□□□□ -0.2
SRP9P49458 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.83□□□□□ -0.2
SRP9P49458 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.83□□□□□ -0.2
SRP9P49458 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.83□□□□□ -0.2
SRP9P49458 SPDYE7P-202ENST00000420373 878 ntBASIC13.83□□□□□ -0.2
SRP9P49458 TSEN15P1-201ENST00000423257 515 ntBASIC13.83□□□□□ -0.2
SRP9P49458 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.83□□□□□ -0.2
SRP9P49458 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.83□□□□□ -0.2
SRP9P49458 ALG1L8P-201ENST00000533887 760 ntBASIC13.83□□□□□ -0.2
SRP9P49458 AC093520.2-201ENST00000561830 333 ntBASIC13.83□□□□□ -0.2
SRP9P49458 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.83□□□□□ -0.2
SRP9P49458 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.83□□□□□ -0.2
SRP9P49458 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.83□□□□□ -0.2
SRP9P49458 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.83□□□□□ -0.2
SRP9P49458 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.83□□□□□ -0.2
SRP9P49458 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.83□□□□□ -0.2
SRP9P49458 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SRP9P49458 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.83□□□□□ -0.2
SRP9P49458 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SRP9P49458 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SRP9P49458 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SRP9P49458 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SRP9P49458 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SRP9P49458 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SRP9P49458 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SRP9P49458 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SRP9P49458 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
SRP9P49458 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.82□□□□□ -0.2
SRP9P49458 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SRP9P49458 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SRP9P49458 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 HAUS4P1-201ENST00000406739 1145 ntBASIC13.82□□□□□ -0.2
SRP9P49458 FAM58DP-201ENST00000428076 619 ntBASIC13.82□□□□□ -0.2
SRP9P49458 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.82□□□□□ -0.2
SRP9P49458 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.82□□□□□ -0.2
SRP9P49458 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.82□□□□□ -0.2
SRP9P49458 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.82□□□□□ -0.2
SRP9P49458 AC025678.2-201ENST00000562061 970 ntBASIC13.82□□□□□ -0.2
SRP9P49458 AC004449.1-201ENST00000564240 433 ntBASIC13.82□□□□□ -0.2
SRP9P49458 RARRES2P9-201ENST00000565168 469 ntBASIC13.82□□□□□ -0.2
SRP9P49458 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 AC027612.4-201ENST00000605371 583 ntBASIC13.82□□□□□ -0.2
SRP9P49458 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.82□□□□□ -0.2
SRP9P49458 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.82□□□□□ -0.2
SRP9P49458 AC010327.5-201ENST00000586923 3061 ntBASIC13.82□□□□□ -0.2
SRP9P49458 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms