Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.74□□□□□ -0.05
RORAP35398 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.74□□□□□ -0.05
RORAP35398 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RORAP35398 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.74□□□□□ -0.05
RORAP35398 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.74□□□□□ -0.05
RORAP35398 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.73□□□□□ -0.05
RORAP35398 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 PRAL-201ENST00000624952 3286 ntBASIC14.73□□□□□ -0.05
RORAP35398 PDIA3P1-201ENST00000471856 1510 ntBASIC14.73□□□□□ -0.05
RORAP35398 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.73□□□□□ -0.05
RORAP35398 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RORAP35398 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.73□□□□□ -0.05
RORAP35398 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
RORAP35398 GAPDHP40-201ENST00000505218 1006 ntBASIC14.73□□□□□ -0.05
RORAP35398 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
RORAP35398 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RORAP35398 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.73□□□□□ -0.05
RORAP35398 AC093813.1-201ENST00000605066 256 ntBASIC14.73□□□□□ -0.05
RORAP35398 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.73□□□□□ -0.05
RORAP35398 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.73□□□□□ -0.05
RORAP35398 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.73□□□□□ -0.05
RORAP35398 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.73□□□□□ -0.05
RORAP35398 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RORAP35398 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RORAP35398 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.73□□□□□ -0.05
RORAP35398 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.73□□□□□ -0.05
RORAP35398 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.73□□□□□ -0.05
RORAP35398 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.73□□□□□ -0.05
RORAP35398 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RORAP35398 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.72□□□□□ -0.05
RORAP35398 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.72□□□□□ -0.05
RORAP35398 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 AC023824.1-201ENST00000562945 2975 ntBASIC14.72□□□□□ -0.05
RORAP35398 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.72□□□□□ -0.05
RORAP35398 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.72□□□□□ -0.05
RORAP35398 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.72□□□□□ -0.05
RORAP35398 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.72□□□□□ -0.05
RORAP35398 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 BAATP1-201ENST00000412284 1225 ntBASIC14.72□□□□□ -0.05
RORAP35398 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 HLA-V-201ENST00000429037 534 ntBASIC14.72□□□□□ -0.05
RORAP35398 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.72□□□□□ -0.05
RORAP35398 AC012441.1-201ENST00000446669 685 ntBASIC14.72□□□□□ -0.05
RORAP35398 BCRP2-202ENST00000447763 634 ntBASIC14.72□□□□□ -0.05
RORAP35398 AC093433.1-201ENST00000458048 571 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms