Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
APEX1P27695 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
APEX1P27695 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.08□□□□□ -0.16
APEX1P27695 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APEX1P27695 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.08□□□□□ -0.16
APEX1P27695 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.08□□□□□ -0.16
APEX1P27695 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APEX1P27695 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.08□□□□□ -0.16
APEX1P27695 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APEX1P27695 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
APEX1P27695 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
APEX1P27695 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
APEX1P27695 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.07□□□□□ -0.16
APEX1P27695 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
APEX1P27695 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.07□□□□□ -0.16
APEX1P27695 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
APEX1P27695 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.07□□□□□ -0.16
APEX1P27695 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.07□□□□□ -0.16
APEX1P27695 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
APEX1P27695 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.07□□□□□ -0.16
APEX1P27695 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.07□□□□□ -0.16
APEX1P27695 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.07□□□□□ -0.16
APEX1P27695 AC109322.1-201ENST00000524499 1264 ntBASIC14.07□□□□□ -0.16
APEX1P27695 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
APEX1P27695 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
APEX1P27695 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
APEX1P27695 AC003101.2-201ENST00000612557 442 ntBASIC14.07□□□□□ -0.16
APEX1P27695 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
APEX1P27695 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.07□□□□□ -0.16
APEX1P27695 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
APEX1P27695 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 AJ011931.1-201ENST00000618749 2492 ntBASIC14.07□□□□□ -0.16
APEX1P27695 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APEX1P27695 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
APEX1P27695 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.06□□□□□ -0.16
APEX1P27695 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.06□□□□□ -0.16
APEX1P27695 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.06□□□□□ -0.16
APEX1P27695 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.06□□□□□ -0.16
APEX1P27695 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.06□□□□□ -0.16
APEX1P27695 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.06□□□□□ -0.16
APEX1P27695 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
APEX1P27695 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
APEX1P27695 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.06□□□□□ -0.16
APEX1P27695 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.06□□□□□ -0.16
APEX1P27695 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.06□□□□□ -0.16
APEX1P27695 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.06□□□□□ -0.16
APEX1P27695 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.06□□□□□ -0.16
APEX1P27695 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.06□□□□□ -0.16
APEX1P27695 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
APEX1P27695 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 AC018529.1-201ENST00000613063 361 ntBASIC14.06□□□□□ -0.16
APEX1P27695 MIR6080-201ENST00000617359 66 ntBASIC14.06□□□□□ -0.16
APEX1P27695 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
APEX1P27695 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.06□□□□□ -0.16
APEX1P27695 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.06□□□□□ -0.16
APEX1P27695 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
APEX1P27695 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APEX1P27695 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APEX1P27695 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms