Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CTSSP25774 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.83□□□□□ -0.2
CTSSP25774 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CTSSP25774 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CTSSP25774 AC112693.3-201ENST00000624819 1983 ntBASIC13.83□□□□□ -0.2
CTSSP25774 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CTSSP25774 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSSP25774 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CTSSP25774 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSSP25774 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSSP25774 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSSP25774 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.83□□□□□ -0.2
CTSSP25774 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CTSSP25774 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSSP25774 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSSP25774 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSSP25774 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSSP25774 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CTSSP25774 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CTSSP25774 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 MST1L-201ENST00000442552 2185 ntBASIC13.82□□□□□ -0.2
CTSSP25774 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CTSSP25774 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 AC119751.2-201ENST00000504529 210 ntBASIC13.82□□□□□ -0.2
CTSSP25774 AC026410.3-201ENST00000514280 936 ntBASIC13.82□□□□□ -0.2
CTSSP25774 AP001889.1-201ENST00000525414 633 ntBASIC13.82□□□□□ -0.2
CTSSP25774 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.82□□□□□ -0.2
CTSSP25774 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.82□□□□□ -0.2
CTSSP25774 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 CLUHP6-201ENST00000580789 941 ntBASIC13.82□□□□□ -0.2
CTSSP25774 MIR4259-201ENST00000584466 101 ntBASIC13.82□□□□□ -0.2
CTSSP25774 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CTSSP25774 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.82□□□□□ -0.2
CTSSP25774 MIR6799-201ENST00000620297 69 ntBASIC13.82□□□□□ -0.2
CTSSP25774 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.82□□□□□ -0.2
CTSSP25774 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CTSSP25774 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTSSP25774 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSSP25774 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.81□□□□□ -0.2
CTSSP25774 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTSSP25774 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CTSSP25774 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.81□□□□□ -0.2
CTSSP25774 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CTSSP25774 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CTSSP25774 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSSP25774 PDIA3P1-201ENST00000471856 1510 ntBASIC13.81□□□□□ -0.2
CTSSP25774 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSSP25774 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.81□□□□□ -0.2
CTSSP25774 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTSSP25774 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTSSP25774 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CTSSP25774 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms