Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
MMP8P22894 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.24■□□□□ 0.19
MMP8P22894 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MMP8P22894 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.24■□□□□ 0.19
MMP8P22894 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 CICP23-201ENST00000605013 2741 ntBASIC16.24■□□□□ 0.19
MMP8P22894 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.24■□□□□ 0.19
MMP8P22894 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.24■□□□□ 0.19
MMP8P22894 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 AL049840.4-201ENST00000602422 811 ntBASIC16.24■□□□□ 0.19
MMP8P22894 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.24■□□□□ 0.19
MMP8P22894 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.24■□□□□ 0.19
MMP8P22894 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
MMP8P22894 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.24■□□□□ 0.19
MMP8P22894 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 SLC7A15P-201ENST00000424028 1363 ntBASIC16.24■□□□□ 0.19
MMP8P22894 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.24■□□□□ 0.19
MMP8P22894 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.24■□□□□ 0.19
MMP8P22894 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MMP8P22894 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 LINC02228-204ENST00000642115 2962 ntBASIC16.23■□□□□ 0.19
MMP8P22894 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
MMP8P22894 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
MMP8P22894 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MMP8P22894 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 FGD5P1-202ENST00000614866 2498 ntBASIC16.23■□□□□ 0.19
MMP8P22894 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.23■□□□□ 0.19
MMP8P22894 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MMP8P22894 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MMP8P22894 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.23■□□□□ 0.19
MMP8P22894 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
MMP8P22894 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.23■□□□□ 0.19
MMP8P22894 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.23■□□□□ 0.19
MMP8P22894 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.23■□□□□ 0.19
MMP8P22894 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 AC004066.1-201ENST00000502488 802 ntBASIC16.23■□□□□ 0.19
MMP8P22894 SERBP1P5-201ENST00000510079 1181 ntBASIC16.23■□□□□ 0.19
MMP8P22894 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.23■□□□□ 0.19
MMP8P22894 AC055876.2-201ENST00000531834 546 ntBASIC16.23■□□□□ 0.19
MMP8P22894 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MMP8P22894 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
MMP8P22894 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms