Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.89■□□□□ 0.29
RFX1P22670 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX1P22670 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX1P22670 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX1P22670 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RFX1P22670 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RFX1P22670 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RFX1P22670 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX1P22670 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX1P22670 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.88■□□□□ 0.29
RFX1P22670 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX1P22670 AC055876.2-201ENST00000531834 546 ntBASIC16.88■□□□□ 0.29
RFX1P22670 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX1P22670 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.88■□□□□ 0.29
RFX1P22670 AC025048.3-201ENST00000590609 569 ntBASIC16.88■□□□□ 0.29
RFX1P22670 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX1P22670 AC005702.4-201ENST00000618393 416 ntBASIC16.88■□□□□ 0.29
RFX1P22670 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX1P22670 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFX1P22670 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RFX1P22670 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFX1P22670 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.88■□□□□ 0.29
RFX1P22670 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.88■□□□□ 0.29
RFX1P22670 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RFX1P22670 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFX1P22670 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RFX1P22670 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFX1P22670 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX1P22670 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFX1P22670 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX1P22670 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RFX1P22670 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX1P22670 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX1P22670 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX1P22670 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 AL133267.1-201ENST00000398220 340 ntBASIC16.87■□□□□ 0.29
RFX1P22670 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX1P22670 AC022210.1-201ENST00000449856 793 ntBASIC16.87■□□□□ 0.29
RFX1P22670 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.87■□□□□ 0.29
RFX1P22670 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX1P22670 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX1P22670 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX1P22670 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.87■□□□□ 0.29
RFX1P22670 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.87■□□□□ 0.29
RFX1P22670 MIR4525-201ENST00000580000 75 ntBASIC16.87■□□□□ 0.29
RFX1P22670 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RFX1P22670 AC084346.2-201ENST00000607097 949 ntBASIC16.87■□□□□ 0.29
RFX1P22670 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.87■□□□□ 0.29
RFX1P22670 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.87■□□□□ 0.29
RFX1P22670 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFX1P22670 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RFX1P22670 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RFX1P22670 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.87■□□□□ 0.29
RFX1P22670 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFX1P22670 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.86■□□□□ 0.29
RFX1P22670 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.86■□□□□ 0.29
RFX1P22670 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.86■□□□□ 0.29
RFX1P22670 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.86■□□□□ 0.29
RFX1P22670 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.86■□□□□ 0.29
RFX1P22670 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.86■□□□□ 0.29
RFX1P22670 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.86■□□□□ 0.29
RFX1P22670 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RFX1P22670 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFX1P22670 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms