Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.29■□□□□ 0.68
ITGB4P16144 RNA5SP359-201ENST00000364838 113 ntBASIC19.29■□□□□ 0.68
ITGB4P16144 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC19.29■□□□□ 0.68
ITGB4P16144 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.29■□□□□ 0.68
ITGB4P16144 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.29■□□□□ 0.68
ITGB4P16144 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.29■□□□□ 0.68
ITGB4P16144 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 WT1-AS_6.1-201ENST00000614919 121 ntBASIC19.29■□□□□ 0.68
ITGB4P16144 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ITGB4P16144 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.29■□□□□ 0.68
ITGB4P16144 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ITGB4P16144 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ITGB4P16144 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITGB4P16144 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.29■□□□□ 0.68
ITGB4P16144 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ITGB4P16144 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.28■□□□□ 0.68
ITGB4P16144 LINC01165-201ENST00000445190 1623 ntBASIC19.28■□□□□ 0.68
ITGB4P16144 LINC02199-201ENST00000506655 2702 ntBASIC19.28■□□□□ 0.68
ITGB4P16144 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ITGB4P16144 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC19.28■□□□□ 0.68
ITGB4P16144 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.28■□□□□ 0.68
ITGB4P16144 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.28■□□□□ 0.68
ITGB4P16144 PTK2-225ENST00000520892 571 ntTSL 4 BASIC19.28■□□□□ 0.68
ITGB4P16144 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.28■□□□□ 0.68
ITGB4P16144 AC087045.2-201ENST00000606279 1003 ntBASIC19.28■□□□□ 0.68
ITGB4P16144 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ITGB4P16144 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 PCDHB19P-201ENST00000570871 2371 ntBASIC19.28■□□□□ 0.68
ITGB4P16144 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ITGB4P16144 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.28■□□□□ 0.68
ITGB4P16144 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.28■□□□□ 0.68
ITGB4P16144 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
ITGB4P16144 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.28■□□□□ 0.68
ITGB4P16144 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.28■□□□□ 0.68
ITGB4P16144 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC19.28■□□□□ 0.68
ITGB4P16144 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.28■□□□□ 0.68
ITGB4P16144 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.28■□□□□ 0.68
ITGB4P16144 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.28■□□□□ 0.68
ITGB4P16144 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITGB4P16144 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ITGB4P16144 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.27■□□□□ 0.68
ITGB4P16144 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ITGB4P16144 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGB4P16144 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ITGB4P16144 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ITGB4P16144 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ITGB4P16144 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGB4P16144 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ITGB4P16144 AC015909.3-201ENST00000572855 1794 ntBASIC19.27■□□□□ 0.68
ITGB4P16144 AP000845.1-201ENST00000581677 2131 ntBASIC19.27■□□□□ 0.68
ITGB4P16144 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGB4P16144 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGB4P16144 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITGB4P16144 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ITGB4P16144 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ITGB4P16144 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.27■□□□□ 0.68
ITGB4P16144 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ITGB4P16144 HPN-206ENST00000597419 1212 ntTSL 5 BASIC19.27■□□□□ 0.68
ITGB4P16144 AC092171.5-201ENST00000608012 942 ntBASIC19.27■□□□□ 0.68
ITGB4P16144 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC19.27■□□□□ 0.68
ITGB4P16144 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.27■□□□□ 0.68
ITGB4P16144 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ITGB4P16144 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.27■□□□□ 0.67
ITGB4P16144 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ITGB4P16144 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.27■□□□□ 0.67
ITGB4P16144 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ITGB4P16144 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.27■□□□□ 0.67
ITGB4P16144 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.27■□□□□ 0.67
ITGB4P16144 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.27■□□□□ 0.67
ITGB4P16144 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITGB4P16144 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITGB4P16144 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITGB4P16144 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITGB4P16144 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITGB4P16144 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.26■□□□□ 0.67
ITGB4P16144 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.26■□□□□ 0.67
ITGB4P16144 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC19.26■□□□□ 0.67
ITGB4P16144 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC19.26■□□□□ 0.67
ITGB4P16144 SCARNA21-201ENST00000517026 139 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms