Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 AC099336.1-201ENST00000417053 1171 ntBASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 FAM21FP-201ENST00000426241 1131 ntBASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 AL583810.1-201ENST00000553344 1045 ntBASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 AL603832.2-201ENST00000566195 2125 ntBASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 AP005019.2-201ENST00000615104 511 ntBASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 AC068418.2-201ENST00000577309 3703 ntBASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40ALP0C0E4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 C2orf27AP3-201ENST00000434123 579 ntBASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 AL354718.3-201ENST00000616414 581 ntBASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 CR382287.1-201ENST00000623954 586 ntBASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 AC069224.1-201ENST00000566372 1715 ntBASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 REXO1L6P-201ENST00000603433 1515 ntBASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 TUBB1P2-201ENST00000422712 1306 ntBASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 TUBB1P1-201ENST00000503144 1300 ntBASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40ALP0C0E4 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms