Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CHMP1AP1-201ENST00000445563 662 ntBASIC16.68■□□□□ 0.26
CHRNA1P02708 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA1P02708 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA1P02708 DUX4L47-201ENST00000566374 394 ntBASIC16.68■□□□□ 0.26
CHRNA1P02708 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.68■□□□□ 0.26
CHRNA1P02708 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.68■□□□□ 0.26
CHRNA1P02708 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA1P02708 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.68■□□□□ 0.26
CHRNA1P02708 ZACNP1-201ENST00000612259 710 ntBASIC16.68■□□□□ 0.26
CHRNA1P02708 AL603764.1-201ENST00000636452 321 ntBASIC16.68■□□□□ 0.26
CHRNA1P02708 PCDHB19P-201ENST00000570871 2371 ntBASIC16.68■□□□□ 0.26
CHRNA1P02708 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA1P02708 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.68■□□□□ 0.26
CHRNA1P02708 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHRNA1P02708 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CHRNA1P02708 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHRNA1P02708 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA1P02708 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
CHRNA1P02708 CLUHP2-201ENST00000426660 1303 ntBASIC16.68■□□□□ 0.26
CHRNA1P02708 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.68■□□□□ 0.26
CHRNA1P02708 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CHRNA1P02708 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA1P02708 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA1P02708 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CHRNA1P02708 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA1P02708 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA1P02708 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA1P02708 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.67■□□□□ 0.26
CHRNA1P02708 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.67■□□□□ 0.26
CHRNA1P02708 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.67■□□□□ 0.26
CHRNA1P02708 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.67■□□□□ 0.26
CHRNA1P02708 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.67■□□□□ 0.26
CHRNA1P02708 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.67■□□□□ 0.26
CHRNA1P02708 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.67■□□□□ 0.26
CHRNA1P02708 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA1P02708 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.67■□□□□ 0.26
CHRNA1P02708 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA1P02708 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CHRNA1P02708 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHRNA1P02708 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA1P02708 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA1P02708 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CHRNA1P02708 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CHRNA1P02708 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA1P02708 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA1P02708 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CHRNA1P02708 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA1P02708 NKAIN1P1-201ENST00000435754 582 ntBASIC16.66■□□□□ 0.26
CHRNA1P02708 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA1P02708 HIST2H2BB-201ENST00000449108 381 ntBASIC16.66■□□□□ 0.26
CHRNA1P02708 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.66■□□□□ 0.26
CHRNA1P02708 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA1P02708 AC100850.1-201ENST00000506768 649 ntBASIC16.66■□□□□ 0.26
CHRNA1P02708 RNA5SP423-201ENST00000517127 109 ntBASIC16.66■□□□□ 0.26
CHRNA1P02708 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.66■□□□□ 0.26
CHRNA1P02708 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA1P02708 AC005730.2-201ENST00000564549 1184 ntBASIC16.66■□□□□ 0.26
CHRNA1P02708 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHRNA1P02708 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms