Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.32■□□□□ 0.36
GGPS1O95749 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 CICP13-201ENST00000422015 2789 ntBASIC17.32■□□□□ 0.36
GGPS1O95749 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.32■□□□□ 0.36
GGPS1O95749 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GGPS1O95749 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GGPS1O95749 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.31■□□□□ 0.36
GGPS1O95749 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GGPS1O95749 AC148477.4-201ENST00000613430 1793 ntBASIC17.31■□□□□ 0.36
GGPS1O95749 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.31■□□□□ 0.36
GGPS1O95749 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.31■□□□□ 0.36
GGPS1O95749 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.31■□□□□ 0.36
GGPS1O95749 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.31■□□□□ 0.36
GGPS1O95749 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
GGPS1O95749 ACTBP8-201ENST00000403258 1108 ntBASIC17.31■□□□□ 0.36
GGPS1O95749 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.31■□□□□ 0.36
GGPS1O95749 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.31■□□□□ 0.36
GGPS1O95749 AC114812.1-204ENST00000449669 728 ntBASIC17.31■□□□□ 0.36
GGPS1O95749 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 AC138951.2-201ENST00000623455 1161 ntBASIC17.31■□□□□ 0.36
GGPS1O95749 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.31■□□□□ 0.36
GGPS1O95749 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
GGPS1O95749 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GGPS1O95749 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
GGPS1O95749 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GGPS1O95749 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GGPS1O95749 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.3■□□□□ 0.36
GGPS1O95749 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.3■□□□□ 0.36
GGPS1O95749 AC104640.1-201ENST00000562617 2109 ntBASIC17.3■□□□□ 0.36
GGPS1O95749 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
GGPS1O95749 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GGPS1O95749 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
GGPS1O95749 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GGPS1O95749 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 AC006001.1-201ENST00000325130 474 ntBASIC17.3■□□□□ 0.36
GGPS1O95749 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GGPS1O95749 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GGPS1O95749 NUS1P3-201ENST00000423502 862 ntBASIC17.3■□□□□ 0.36
GGPS1O95749 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.3■□□□□ 0.36
GGPS1O95749 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.3■□□□□ 0.36
GGPS1O95749 AL590640.2-201ENST00000457038 527 ntBASIC17.3■□□□□ 0.36
GGPS1O95749 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.3■□□□□ 0.36
GGPS1O95749 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
GGPS1O95749 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.3■□□□□ 0.36
GGPS1O95749 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.3■□□□□ 0.36
GGPS1O95749 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.3■□□□□ 0.36
GGPS1O95749 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.3■□□□□ 0.36
GGPS1O95749 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.3■□□□□ 0.36
GGPS1O95749 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.3■□□□□ 0.36
GGPS1O95749 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.3■□□□□ 0.36
GGPS1O95749 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.3■□□□□ 0.36
GGPS1O95749 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.3■□□□□ 0.36
GGPS1O95749 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GGPS1O95749 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.3■□□□□ 0.36
GGPS1O95749 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GGPS1O95749 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
GGPS1O95749 AP005117.1-202ENST00000581724 1908 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms