Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 AC004899.2-201ENST00000622993 3860 ntBASIC13.03□□□□□ -0.32
SIX6O95475 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.03□□□□□ -0.32
SIX6O95475 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
SIX6O95475 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.02□□□□□ -0.32
SIX6O95475 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.02□□□□□ -0.32
SIX6O95475 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.02□□□□□ -0.32
SIX6O95475 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SIX6O95475 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.02□□□□□ -0.32
SIX6O95475 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SIX6O95475 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.02□□□□□ -0.32
SIX6O95475 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
SIX6O95475 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.02□□□□□ -0.33
SIX6O95475 AC113347.1-201ENST00000413321 391 ntBASIC13.02□□□□□ -0.33
SIX6O95475 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.02□□□□□ -0.33
SIX6O95475 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SIX6O95475 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.02□□□□□ -0.33
SIX6O95475 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.02□□□□□ -0.33
SIX6O95475 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.02□□□□□ -0.33
SIX6O95475 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.02□□□□□ -0.33
SIX6O95475 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.02□□□□□ -0.33
SIX6O95475 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SIX6O95475 AC139887.3-201ENST00000568585 713 ntBASIC13.02□□□□□ -0.33
SIX6O95475 AC004706.3-202ENST00000621574 984 ntBASIC13.02□□□□□ -0.33
SIX6O95475 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.02□□□□□ -0.33
SIX6O95475 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
SIX6O95475 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SIX6O95475 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SIX6O95475 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
SIX6O95475 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SIX6O95475 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.02□□□□□ -0.33
SIX6O95475 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.02□□□□□ -0.33
SIX6O95475 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.02□□□□□ -0.33
SIX6O95475 AC131212.3-201ENST00000624087 4219 ntBASIC13.02□□□□□ -0.33
SIX6O95475 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SIX6O95475 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SIX6O95475 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 RNU1-129P-201ENST00000384064 167 ntBASIC13.01□□□□□ -0.33
SIX6O95475 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SIX6O95475 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.01□□□□□ -0.33
SIX6O95475 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 POM121L3P-201ENST00000419331 1163 ntBASIC13.01□□□□□ -0.33
SIX6O95475 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.01□□□□□ -0.33
SIX6O95475 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 TOB2P1-201ENST00000469761 992 ntBASIC13.01□□□□□ -0.33
SIX6O95475 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SIX6O95475 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.01□□□□□ -0.33
SIX6O95475 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.01□□□□□ -0.33
SIX6O95475 MIR5100-201ENST00000579544 119 ntBASIC13.01□□□□□ -0.33
SIX6O95475 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.01□□□□□ -0.33
SIX6O95475 U1.21-201ENST00000580816 167 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms