Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 AC145098.2-201ENST00000623593 3026 ntBASIC12.76□□□□□ -0.37
CLN5O75503 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.76□□□□□ -0.37
CLN5O75503 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.76□□□□□ -0.37
CLN5O75503 IGLL3P-201ENST00000412472 434 ntBASIC12.76□□□□□ -0.37
CLN5O75503 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 HCG4B-203ENST00000450128 991 ntBASIC12.76□□□□□ -0.37
CLN5O75503 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.76□□□□□ -0.37
CLN5O75503 KRT18P34-201ENST00000488218 1270 ntBASIC12.76□□□□□ -0.37
CLN5O75503 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.76□□□□□ -0.37
CLN5O75503 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.76□□□□□ -0.37
CLN5O75503 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.76□□□□□ -0.37
CLN5O75503 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.76□□□□□ -0.37
CLN5O75503 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.76□□□□□ -0.37
CLN5O75503 AP001005.1-201ENST00000571755 1248 ntBASIC12.76□□□□□ -0.37
CLN5O75503 AC104692.2-201ENST00000603054 253 ntBASIC12.76□□□□□ -0.37
CLN5O75503 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CLN5O75503 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CLN5O75503 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CLN5O75503 LINC01230-201ENST00000625222 3017 ntBASIC12.76□□□□□ -0.37
CLN5O75503 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.76□□□□□ -0.37
CLN5O75503 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLN5O75503 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN5O75503 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLN5O75503 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CLN5O75503 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CLN5O75503 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CLN5O75503 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLN5O75503 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CLN5O75503 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.75□□□□□ -0.37
CLN5O75503 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.75□□□□□ -0.37
CLN5O75503 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.75□□□□□ -0.37
CLN5O75503 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.75□□□□□ -0.37
CLN5O75503 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.75□□□□□ -0.37
CLN5O75503 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.75□□□□□ -0.37
CLN5O75503 RNA5SP415-201ENST00000517246 115 ntBASIC12.75□□□□□ -0.37
CLN5O75503 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CLN5O75503 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.75□□□□□ -0.37
CLN5O75503 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 AC013726.1-201ENST00000563747 2285 ntBASIC12.75□□□□□ -0.37
CLN5O75503 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.75□□□□□ -0.37
CLN5O75503 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CLN5O75503 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN5O75503 AL009183.1-201ENST00000603760 355 ntBASIC12.75□□□□□ -0.37
CLN5O75503 AC023141.13-201ENST00000604991 943 ntBASIC12.75□□□□□ -0.37
CLN5O75503 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CLN5O75503 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.75□□□□□ -0.37
CLN5O75503 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms