Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEF11O60813 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.64■□□□□ 0.1
PRAMEF11O60813 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 ACKR1-201ENST00000368121 1240 ntBASIC15.64■□□□□ 0.09
PRAMEF11O60813 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 NUS1P3-201ENST00000423502 862 ntBASIC15.64■□□□□ 0.09
PRAMEF11O60813 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF11O60813 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEF11O60813 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 WASH3P-207ENST00000560956 1394 ntBASIC15.63■□□□□ 0.09
PRAMEF11O60813 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 AL512384.1-201ENST00000406683 331 ntBASIC15.63■□□□□ 0.09
PRAMEF11O60813 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 ACTG1P3-201ENST00000431775 1114 ntBASIC15.63■□□□□ 0.09
PRAMEF11O60813 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 AC009486.1-201ENST00000569860 813 ntBASIC15.63■□□□□ 0.09
PRAMEF11O60813 AP000845.1-201ENST00000581677 2131 ntBASIC15.63■□□□□ 0.09
PRAMEF11O60813 AC010319.3-201ENST00000597028 470 ntBASIC15.63■□□□□ 0.09
PRAMEF11O60813 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PRAMEF11O60813 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF11O60813 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF11O60813 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PRAMEF11O60813 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms