Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 RN7SL589P-201ENST00000481268 310 ntBASIC14.34□□□□□ -0.11
IDH3BO43837 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.34□□□□□ -0.11
IDH3BO43837 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.34□□□□□ -0.11
IDH3BO43837 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.34□□□□□ -0.11
IDH3BO43837 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.34□□□□□ -0.11
IDH3BO43837 AC027601.4-201ENST00000611259 610 ntBASIC14.34□□□□□ -0.11
IDH3BO43837 FAM197Y3-203ENST00000618346 717 ntBASIC14.34□□□□□ -0.11
IDH3BO43837 AL513190.1-201ENST00000621254 727 ntBASIC14.34□□□□□ -0.11
IDH3BO43837 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IDH3BO43837 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IDH3BO43837 FOXO1B-201ENST00000504678 1527 ntBASIC14.34□□□□□ -0.11
IDH3BO43837 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IDH3BO43837 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.34□□□□□ -0.11
IDH3BO43837 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
IDH3BO43837 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IDH3BO43837 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
IDH3BO43837 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.34□□□□□ -0.11
IDH3BO43837 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.34□□□□□ -0.11
IDH3BO43837 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.34□□□□□ -0.11
IDH3BO43837 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IDH3BO43837 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.34□□□□□ -0.11
IDH3BO43837 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
IDH3BO43837 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IDH3BO43837 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.34□□□□□ -0.11
IDH3BO43837 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
IDH3BO43837 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
IDH3BO43837 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IDH3BO43837 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
IDH3BO43837 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
IDH3BO43837 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IDH3BO43837 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
IDH3BO43837 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
IDH3BO43837 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IDH3BO43837 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
IDH3BO43837 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.33□□□□□ -0.12
IDH3BO43837 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 AL355306.1-201ENST00000415580 579 ntBASIC14.33□□□□□ -0.12
IDH3BO43837 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.33□□□□□ -0.12
IDH3BO43837 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.33□□□□□ -0.12
IDH3BO43837 AL135744.1-201ENST00000565098 629 ntBASIC14.33□□□□□ -0.12
IDH3BO43837 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
IDH3BO43837 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
IDH3BO43837 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
IDH3BO43837 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IDH3BO43837 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
IDH3BO43837 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
IDH3BO43837 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
IDH3BO43837 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.32□□□□□ -0.12
IDH3BO43837 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.32□□□□□ -0.12
IDH3BO43837 AL390755.1-201ENST00000623716 2027 ntBASIC14.32□□□□□ -0.12
IDH3BO43837 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IDH3BO43837 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IDH3BO43837 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.32□□□□□ -0.12
IDH3BO43837 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.32□□□□□ -0.12
IDH3BO43837 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IDH3BO43837 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IDH3BO43837 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IDH3BO43837 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IDH3BO43837 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IDH3BO43837 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
IDH3BO43837 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
IDH3BO43837 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
IDH3BO43837 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms