Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNRC18O15417 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.18■□□□□ 0.18
TNRC18O15417 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNRC18O15417 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.18■□□□□ 0.18
TNRC18O15417 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.18■□□□□ 0.18
TNRC18O15417 XBP1P1-201ENST00000436573 652 ntBASIC16.18■□□□□ 0.18
TNRC18O15417 AC008026.2-201ENST00000495438 348 ntBASIC16.18■□□□□ 0.18
TNRC18O15417 RN7SL665P-201ENST00000578793 300 ntBASIC16.18■□□□□ 0.18
TNRC18O15417 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC16.18■□□□□ 0.18
TNRC18O15417 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.18■□□□□ 0.18
TNRC18O15417 AHCYP4-201ENST00000419201 1315 ntBASIC16.18■□□□□ 0.18
TNRC18O15417 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNRC18O15417 FUCA1P1-201ENST00000374476 1351 ntBASIC16.18■□□□□ 0.18
TNRC18O15417 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.18■□□□□ 0.18
TNRC18O15417 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TNRC18O15417 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNRC18O15417 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNRC18O15417 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TNRC18O15417 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNRC18O15417 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNRC18O15417 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TNRC18O15417 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNRC18O15417 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TNRC18O15417 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.17■□□□□ 0.18
TNRC18O15417 AL627095.1-201ENST00000414775 321 ntBASIC16.17■□□□□ 0.18
TNRC18O15417 AC026884.1-201ENST00000418296 457 ntBASIC16.17■□□□□ 0.18
TNRC18O15417 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 MYL6-215ENST00000549566 685 ntTSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.17■□□□□ 0.18
TNRC18O15417 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC16.17■□□□□ 0.18
TNRC18O15417 AC245369.7-201ENST00000631386 350 ntBASIC16.17■□□□□ 0.18
TNRC18O15417 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.17■□□□□ 0.18
TNRC18O15417 REXO1L2P-201ENST00000425429 2069 ntBASIC16.17■□□□□ 0.18
TNRC18O15417 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNRC18O15417 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNRC18O15417 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.17■□□□□ 0.18
TNRC18O15417 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNRC18O15417 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.17■□□□□ 0.18
TNRC18O15417 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC16.17■□□□□ 0.18
TNRC18O15417 MIR6720-201ENST00000611664 98 ntBASIC16.17■□□□□ 0.18
TNRC18O15417 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNRC18O15417 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNRC18O15417 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.17■□□□□ 0.18
TNRC18O15417 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TNRC18O15417 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNRC18O15417 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TNRC18O15417 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC16.17■□□□□ 0.18
TNRC18O15417 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.17■□□□□ 0.18
TNRC18O15417 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC16.17■□□□□ 0.18
TNRC18O15417 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.17■□□□□ 0.18
TNRC18O15417 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TNRC18O15417 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.16■□□□□ 0.18
TNRC18O15417 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TNRC18O15417 AC060834.1-201ENST00000443027 2032 ntBASIC16.16■□□□□ 0.18
TNRC18O15417 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TNRC18O15417 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.16■□□□□ 0.18
TNRC18O15417 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 RN7SL147P-201ENST00000487345 298 ntBASIC16.16■□□□□ 0.18
TNRC18O15417 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.16■□□□□ 0.18
TNRC18O15417 MIR2278-201ENST00000516344 96 ntBASIC16.16■□□□□ 0.18
TNRC18O15417 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.16■□□□□ 0.18
TNRC18O15417 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.16■□□□□ 0.18
TNRC18O15417 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC16.16■□□□□ 0.18
TNRC18O15417 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TNRC18O15417 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TNRC18O15417 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TNRC18O15417 PYY2-201ENST00000315776 282 ntBASIC16.16■□□□□ 0.18
TNRC18O15417 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 AL080243.1-201ENST00000423293 1060 ntBASIC16.16■□□□□ 0.18
TNRC18O15417 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.16■□□□□ 0.18
TNRC18O15417 KRT18P37-201ENST00000520711 1282 ntBASIC16.16■□□□□ 0.18
TNRC18O15417 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.16■□□□□ 0.18
TNRC18O15417 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.16■□□□□ 0.18
TNRC18O15417 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNRC18O15417 AC006449.5-201ENST00000610658 2098 ntBASIC16.16■□□□□ 0.18
TNRC18O15417 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
TNRC18O15417 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
TNRC18O15417 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNRC18O15417 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TNRC18O15417 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TNRC18O15417 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.15■□□□□ 0.18
TNRC18O15417 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC16.15■□□□□ 0.18
TNRC18O15417 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms