Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC24.13■■□□□ 1.45
CHD1O14646 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 HERC2P11-201ENST00000562845 725 ntBASIC24.13■■□□□ 1.45
CHD1O14646 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 AC100756.2-201ENST00000569537 736 ntBASIC24.13■■□□□ 1.45
CHD1O14646 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CHD1O14646 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC24.13■■□□□ 1.45
CHD1O14646 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHD1O14646 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD1O14646 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
CHD1O14646 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHD1O14646 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CHD1O14646 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC24.12■■□□□ 1.45
CHD1O14646 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC24.12■■□□□ 1.45
CHD1O14646 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
CHD1O14646 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CHD1O14646 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHD1O14646 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
CHD1O14646 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD1O14646 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CHD1O14646 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD1O14646 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC24.12■■□□□ 1.45
CHD1O14646 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHD1O14646 CELP-201ENST00000411440 1249 ntTSL 5 BASIC24.12■■□□□ 1.45
CHD1O14646 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHD1O14646 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHD1O14646 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC24.12■■□□□ 1.45
CHD1O14646 MBP-238ENST00000580402 915 ntTSL 5 BASIC24.12■■□□□ 1.45
CHD1O14646 CR392039.1-201ENST00000623217 204 ntBASIC24.12■■□□□ 1.45
CHD1O14646 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC24.12■■□□□ 1.45
CHD1O14646 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC24.12■■□□□ 1.45
CHD1O14646 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHD1O14646 PES1-204ENST00000402284 2144 ntTSL 5 BASIC24.12■■□□□ 1.45
CHD1O14646 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC24.12■■□□□ 1.45
CHD1O14646 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CHD1O14646 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
CHD1O14646 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CHD1O14646 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC24.11■■□□□ 1.45
CHD1O14646 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC24.11■■□□□ 1.45
CHD1O14646 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC24.11■■□□□ 1.45
CHD1O14646 GDNF-207ENST00000515058 764 ntTSL 5 BASIC24.11■■□□□ 1.45
CHD1O14646 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC24.11■■□□□ 1.45
CHD1O14646 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC24.11■■□□□ 1.45
CHD1O14646 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CHD1O14646 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHD1O14646 ZBTB45P1-201ENST00000452761 1456 ntBASIC24.11■■□□□ 1.45
CHD1O14646 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.11■■□□□ 1.45
CHD1O14646 AL137783.1-201ENST00000623494 1896 ntBASIC24.11■■□□□ 1.45
CHD1O14646 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD1O14646 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC24.1■■□□□ 1.45
CHD1O14646 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CHD1O14646 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC24.1■■□□□ 1.45
CHD1O14646 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD1O14646 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CHD1O14646 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CHD1O14646 AC073869.2-201ENST00000417338 1026 ntBASIC24.1■■□□□ 1.45
CHD1O14646 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC24.1■■□□□ 1.45
CHD1O14646 AC011462.4-201ENST00000616866 449 ntBASIC24.1■■□□□ 1.45
CHD1O14646 MIR6746-201ENST00000620971 63 ntBASIC24.1■■□□□ 1.45
CHD1O14646 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC24.1■■□□□ 1.45
CHD1O14646 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD1O14646 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD1O14646 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC24.1■■□□□ 1.45
CHD1O14646 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CHD1O14646 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD1O14646 ILF3-AS1-201ENST00000591501 1983 ntBASIC24.1■■□□□ 1.45
CHD1O14646 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
CHD1O14646 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD1O14646 RPL5P21-201ENST00000404620 815 ntBASIC24.1■■□□□ 1.45
CHD1O14646 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC24.1■■□□□ 1.45
CHD1O14646 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD1O14646 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CHD1O14646 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC24.1■■□□□ 1.45
CHD1O14646 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC24.1■■□□□ 1.45
CHD1O14646 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC24.1■■□□□ 1.45
CHD1O14646 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CHD1O14646 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CHD1O14646 SP100-205ENST00000409824 1802 ntTSL 5 BASIC24.09■■□□□ 1.45
CHD1O14646 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD1O14646 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC24.09■■□□□ 1.45
CHD1O14646 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC24.09■■□□□ 1.45
CHD1O14646 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD1O14646 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD1O14646 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC24.09■■□□□ 1.45
CHD1O14646 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CHD1O14646 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC24.09■■□□□ 1.45
CHD1O14646 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms