Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXN3O00409 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.58■□□□□ 0.24
FOXN3O00409 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXN3O00409 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXN3O00409 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXN3O00409 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXN3O00409 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXN3O00409 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
FOXN3O00409 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXN3O00409 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXN3O00409 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
FOXN3O00409 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
FOXN3O00409 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXN3O00409 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FOXN3O00409 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXN3O00409 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXN3O00409 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
FOXN3O00409 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
FOXN3O00409 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.57■□□□□ 0.24
FOXN3O00409 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXN3O00409 RFPL4AP1-201ENST00000530883 850 ntBASIC16.57■□□□□ 0.24
FOXN3O00409 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXN3O00409 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXN3O00409 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
FOXN3O00409 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXN3O00409 LINC01101-201ENST00000622953 1884 ntBASIC16.56■□□□□ 0.24
FOXN3O00409 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXN3O00409 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXN3O00409 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
FOXN3O00409 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FOXN3O00409 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXN3O00409 FGD5P1-202ENST00000614866 2498 ntBASIC16.56■□□□□ 0.24
FOXN3O00409 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.56■□□□□ 0.24
FOXN3O00409 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXN3O00409 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FOXN3O00409 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.56■□□□□ 0.24
FOXN3O00409 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXN3O00409 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
FOXN3O00409 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXN3O00409 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXN3O00409 AL512638.1-201ENST00000457493 794 ntBASIC16.56■□□□□ 0.24
FOXN3O00409 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
FOXN3O00409 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXN3O00409 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXN3O00409 REXO1L4P-201ENST00000605109 1937 ntBASIC16.56■□□□□ 0.24
FOXN3O00409 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXN3O00409 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXN3O00409 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
FOXN3O00409 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXN3O00409 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXN3O00409 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXN3O00409 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FOXN3O00409 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXN3O00409 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FOXN3O00409 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXN3O00409 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms