Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3B1O00203 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.69■□□□□ 0.1
AP3B1O00203 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
AP3B1O00203 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
AP3B1O00203 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
AP3B1O00203 AC104457.1-201ENST00000401024 814 ntBASIC15.69■□□□□ 0.1
AP3B1O00203 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.69■□□□□ 0.1
AP3B1O00203 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3B1O00203 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3B1O00203 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.69■□□□□ 0.1
AP3B1O00203 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
AP3B1O00203 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.69■□□□□ 0.1
AP3B1O00203 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
AP3B1O00203 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3B1O00203 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3B1O00203 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 AC091951.1-201ENST00000512854 2465 ntBASIC15.69■□□□□ 0.1
AP3B1O00203 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.68■□□□□ 0.1
AP3B1O00203 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
AP3B1O00203 AL121723.1-201ENST00000445194 1519 ntBASIC15.68■□□□□ 0.1
AP3B1O00203 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.68■□□□□ 0.1
AP3B1O00203 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 BTBD7P1-201ENST00000447253 1453 ntBASIC15.68■□□□□ 0.1
AP3B1O00203 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.68■□□□□ 0.1
AP3B1O00203 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.68■□□□□ 0.1
AP3B1O00203 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.68■□□□□ 0.1
AP3B1O00203 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.68■□□□□ 0.1
AP3B1O00203 FAM86GP-201ENST00000448322 971 ntBASIC15.68■□□□□ 0.1
AP3B1O00203 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.68■□□□□ 0.1
AP3B1O00203 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.68■□□□□ 0.1
AP3B1O00203 AC000095.1-201ENST00000603208 874 ntBASIC15.68■□□□□ 0.1
AP3B1O00203 AC025181.2-201ENST00000606994 802 ntBASIC15.68■□□□□ 0.1
AP3B1O00203 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.68■□□□□ 0.1
AP3B1O00203 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.68■□□□□ 0.1
AP3B1O00203 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3B1O00203 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.68■□□□□ 0.1
AP3B1O00203 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3B1O00203 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.67■□□□□ 0.1
AP3B1O00203 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
AP3B1O00203 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3B1O00203 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3B1O00203 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP3B1O00203 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP3B1O00203 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
AP3B1O00203 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.67■□□□□ 0.1
AP3B1O00203 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3B1O00203 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
AP3B1O00203 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3B1O00203 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP3B1O00203 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3B1O00203 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3B1O00203 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms