Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 MIR193BHG-211ENST00000641433 5365 ntBASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.55□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AC022400.8-201ENST00000623453 3599 ntBASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 INGX-201ENST00000359239 846 ntBASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AP000523.1-201ENST00000398242 1049 ntBASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AC009947.2-201ENST00000444014 672 ntBASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ECEL1P2-202ENST00000465689 757 ntBASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 STK25P1-201ENST00000585406 838 ntBASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 FAM87A-204ENST00000613235 858 ntBASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AC066615.1-201ENST00000640911 628 ntBASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 LINC01568-207ENST00000641790 1380 ntBASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AL445209.1-201ENST00000607269 3491 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms