Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 KRT19P2-202ENST00000557173 1012 ntBASIC16.9■□□□□ 0.3
CCDC66A2RUB6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC66A2RUB6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC66A2RUB6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC66A2RUB6 MROH4P-201ENST00000431302 1578 ntBASIC16.89■□□□□ 0.3
CCDC66A2RUB6 AC134407.2-201ENST00000625089 1978 ntBASIC16.89■□□□□ 0.3
CCDC66A2RUB6 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC66A2RUB6 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC66A2RUB6 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC66A2RUB6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 PID1-202ENST00000392054 2745 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 AC145285.3-201ENST00000564603 959 ntBASIC16.89■□□□□ 0.29
CCDC66A2RUB6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 AC064836.3-201ENST00000607928 673 ntBASIC16.89■□□□□ 0.29
CCDC66A2RUB6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC66A2RUB6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.88■□□□□ 0.29
CCDC66A2RUB6 AC087481.3-201ENST00000602886 1894 ntBASIC16.88■□□□□ 0.29
CCDC66A2RUB6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms