Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 MIR663B-201ENST00000408361 115 ntBASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 AC079178.1-201ENST00000420915 656 ntBASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 POM121L10P-201ENST00000436994 1285 ntBASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 IGHJ2P-201ENST00000454480 60 ntBASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 AC022616.1-201ENST00000518688 554 ntBASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 SAMD11P1-201ENST00000571429 661 ntBASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 AC244157.2-201ENST00000616239 1006 ntBASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 AL645728.2-202ENST00000641679 227 ntBASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 AC068587.6-202ENST00000641839 5619 ntBASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB7Q9Y5E2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 AC006449.5-201ENST00000610658 2098 ntBASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms