Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 MIR4259-201ENST00000584466 101 ntBASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FNDC3AQ9Y2H6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 AC093726.1-201ENST00000608064 963 ntBASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 MIR6069-201ENST00000620069 79 ntBASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
FNDC3AQ9Y2H6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
FNDC3AQ9Y2H6 AC046158.3-201ENST00000624947 2558 ntBASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FNDC3AQ9Y2H6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms