Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.74■□□□□ 0.11
HACD3Q9P035 AC015910.1-201ENST00000579400 975 ntBASIC15.74■□□□□ 0.11
HACD3Q9P035 AC008738.7-201ENST00000609744 511 ntBASIC15.74■□□□□ 0.11
HACD3Q9P035 AF228730.6-201ENST00000641497 218 ntBASIC15.74■□□□□ 0.11
HACD3Q9P035 AC084121.3-201ENST00000641716 218 ntBASIC15.74■□□□□ 0.11
HACD3Q9P035 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HACD3Q9P035 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HACD3Q9P035 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HACD3Q9P035 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HACD3Q9P035 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HACD3Q9P035 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.74■□□□□ 0.11
HACD3Q9P035 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
HACD3Q9P035 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HACD3Q9P035 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HACD3Q9P035 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HACD3Q9P035 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HACD3Q9P035 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.74■□□□□ 0.11
HACD3Q9P035 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.74■□□□□ 0.11
HACD3Q9P035 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HACD3Q9P035 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HACD3Q9P035 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HACD3Q9P035 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 DBET-201ENST00000630918 3363 ntBASIC15.73■□□□□ 0.11
HACD3Q9P035 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HACD3Q9P035 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.73■□□□□ 0.11
HACD3Q9P035 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.73■□□□□ 0.11
HACD3Q9P035 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.73■□□□□ 0.11
HACD3Q9P035 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.73■□□□□ 0.11
HACD3Q9P035 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HACD3Q9P035 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.73■□□□□ 0.11
HACD3Q9P035 KRT18P64-201ENST00000434946 1219 ntBASIC15.73■□□□□ 0.11
HACD3Q9P035 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.73■□□□□ 0.11
HACD3Q9P035 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.73■□□□□ 0.11
HACD3Q9P035 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.73■□□□□ 0.11
HACD3Q9P035 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HACD3Q9P035 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.73■□□□□ 0.11
HACD3Q9P035 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.73■□□□□ 0.11
HACD3Q9P035 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HACD3Q9P035 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.73■□□□□ 0.11
HACD3Q9P035 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HACD3Q9P035 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.73■□□□□ 0.11
HACD3Q9P035 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HACD3Q9P035 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.73■□□□□ 0.11
HACD3Q9P035 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.72■□□□□ 0.11
HACD3Q9P035 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.72■□□□□ 0.11
HACD3Q9P035 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 OR2I1P-209ENST00000641730 5365 ntBASIC15.72■□□□□ 0.11
HACD3Q9P035 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 SSR4P1-203ENST00000599569 2260 ntBASIC15.72■□□□□ 0.11
HACD3Q9P035 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.72■□□□□ 0.11
HACD3Q9P035 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.72■□□□□ 0.11
HACD3Q9P035 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.72■□□□□ 0.11
HACD3Q9P035 MRPS18AP1-201ENST00000414458 589 ntBASIC15.72■□□□□ 0.11
HACD3Q9P035 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.72■□□□□ 0.11
HACD3Q9P035 FAM8A3P-201ENST00000427218 844 ntBASIC15.72■□□□□ 0.11
HACD3Q9P035 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.72■□□□□ 0.11
HACD3Q9P035 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.72■□□□□ 0.11
HACD3Q9P035 MEIS3P1-201ENST00000495167 958 ntBASIC15.72■□□□□ 0.11
HACD3Q9P035 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.72■□□□□ 0.11
HACD3Q9P035 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
HACD3Q9P035 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.72■□□□□ 0.11
HACD3Q9P035 AJ011932.1-201ENST00000621707 465 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms