Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 AC116407.3-201ENST00000623905 1129 ntBASIC14.22□□□□□ -0.13
CLN6Q9NWW5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 AC015656.1-201ENST00000624209 3578 ntBASIC14.22□□□□□ -0.13
CLN6Q9NWW5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLN6Q9NWW5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 BX640514.1-201ENST00000583223 1918 ntBASIC14.21□□□□□ -0.13
CLN6Q9NWW5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 RPS8P6-201ENST00000426177 609 ntBASIC14.21□□□□□ -0.13
CLN6Q9NWW5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 AC079781.3-201ENST00000449110 356 ntBASIC14.21□□□□□ -0.13
CLN6Q9NWW5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 AC093909.1-201ENST00000504731 1122 ntBASIC14.21□□□□□ -0.13
CLN6Q9NWW5 RNA5SP415-201ENST00000517246 115 ntBASIC14.21□□□□□ -0.13
CLN6Q9NWW5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 SPTSSB-204ENST00000617024 1292 ntBASIC14.21□□□□□ -0.13
CLN6Q9NWW5 AL691432.3-201ENST00000621860 400 ntBASIC14.21□□□□□ -0.13
CLN6Q9NWW5 ACE3P-201ENST00000423435 1973 ntBASIC14.21□□□□□ -0.13
CLN6Q9NWW5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.21□□□□□ -0.13
CLN6Q9NWW5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN6Q9NWW5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
CLN6Q9NWW5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN6Q9NWW5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN6Q9NWW5 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN6Q9NWW5 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN6Q9NWW5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN6Q9NWW5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLN6Q9NWW5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.21□□□□□ -0.14
CLN6Q9NWW5 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.2□□□□□ -0.14
CLN6Q9NWW5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 AC006504.5-208ENST00000588784 2401 ntBASIC14.2□□□□□ -0.14
CLN6Q9NWW5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms