Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CUEDC1Q9NWM3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 AC013268.4-201ENST00000637413 2228 ntBASIC15.04■□□□□ -0
CUEDC1Q9NWM3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 TMBIM7P-203ENST00000641617 1718 ntBASIC15.04■□□□□ -0
CUEDC1Q9NWM3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 AC084364.1-201ENST00000551967 1556 ntBASIC15.04■□□□□ -0
CUEDC1Q9NWM3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 RPS2P32-201ENST00000439199 892 ntBASIC15.04■□□□□ -0
CUEDC1Q9NWM3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 AL132655.2-201ENST00000596276 594 ntBASIC15.04■□□□□ -0
CUEDC1Q9NWM3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.04■□□□□ -0
CUEDC1Q9NWM3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 AC092384.3-202ENST00000564646 2873 ntBASIC15.03■□□□□ -0
CUEDC1Q9NWM3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 AC099063.4-201ENST00000641099 1602 ntBASIC15.03■□□□□ -0
CUEDC1Q9NWM3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.03■□□□□ -0
CUEDC1Q9NWM3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 AL133267.1-201ENST00000398220 340 ntBASIC15.03■□□□□ -0
CUEDC1Q9NWM3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms