Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 AC245128.3-201ENST00000594721 748 ntBASIC18.68■□□□□ 0.58
RNF216Q9NWF9 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 AP002791.1-201ENST00000623291 381 ntBASIC18.68■□□□□ 0.58
RNF216Q9NWF9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 AC083865.1-201ENST00000636634 831 ntBASIC18.68■□□□□ 0.58
RNF216Q9NWF9 AP001153.1-201ENST00000641024 338 ntBASIC18.68■□□□□ 0.58
RNF216Q9NWF9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF216Q9NWF9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TRIM60P9Y-201ENST00000438459 816 ntBASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TRIM60P11Y-201ENST00000445313 801 ntBASIC18.67■□□□□ 0.58
RNF216Q9NWF9 RPL34P26-201ENST00000445636 354 ntBASIC18.67■□□□□ 0.58
RNF216Q9NWF9 AC004837.1-201ENST00000446267 564 ntBASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 PAWRP1-201ENST00000451083 565 ntBASIC18.67■□□□□ 0.58
RNF216Q9NWF9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 FAM86C2P-203ENST00000528684 1004 ntBASIC18.67■□□□□ 0.58
RNF216Q9NWF9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 HNRNPA3P11-201ENST00000564298 934 ntBASIC18.67■□□□□ 0.58
RNF216Q9NWF9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 MTATP6P3-201ENST00000581686 676 ntBASIC18.67■□□□□ 0.58
RNF216Q9NWF9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC18.67■□□□□ 0.58
RNF216Q9NWF9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 AC006338.2-201ENST00000616864 791 ntBASIC18.67■□□□□ 0.58
RNF216Q9NWF9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF216Q9NWF9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 AL135999.2-201ENST00000622438 1686 ntBASIC18.66■□□□□ 0.58
RNF216Q9NWF9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 KCNMB2-207ENST00000452583 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC18.66■□□□□ 0.58
RNF216Q9NWF9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms