Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
FBXO28Q9NVF7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.68■□□□□ 0.42
FBXO28Q9NVF7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FBXO28Q9NVF7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.68■□□□□ 0.42
FBXO28Q9NVF7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 DOC2GP-204ENST00000639052 2548 ntBASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 HLA-K-203ENST00000430151 1046 ntBASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 MTX1P1-201ENST00000440904 838 ntBASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 AP003171.2-201ENST00000528208 925 ntBASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 AC103810.3-201ENST00000583567 96 ntBASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 EEF1DP1-201ENST00000585891 896 ntBASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 AC004466.1-201ENST00000599515 1080 ntBASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 AL096828.3-201ENST00000615354 462 ntBASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 AL645728.2-202ENST00000641679 227 ntBASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FBXO28Q9NVF7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AL157414.3-201ENST00000624276 1954 ntBASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 POM121L8P-201ENST00000417732 1281 ntBASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 POM121L9P-203ENST00000441984 1285 ntBASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AL008638.5-201ENST00000623814 1298 ntBASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AC018735.1-201ENST00000437208 1502 ntBASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 MST1L-201ENST00000442552 2185 ntBASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FBXO28Q9NVF7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms