Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCM2LQ9NUG4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 HSPA7-201ENST00000445535 1927 ntBASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 GK-202ENST00000378941 458 ntTSL 3 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 INGX-202ENST00000489074 768 ntBASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 AC022145.2-201ENST00000598203 171 ntBASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 Z92544.3-201ENST00000624747 417 ntBASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCM2LQ9NUG4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 AC136759.1-202ENST00000530858 2194 ntBASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms