Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 GHSR-202ENST00000427970 912 ntBASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 AC241585.1-201ENST00000433527 519 ntBASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 IGHV3-42-201ENST00000520410 361 ntBASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 CICP11-201ENST00000434745 2827 ntBASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRC40Q9H9A6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 AL161772.1-201ENST00000610494 4412 ntBASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 TIMM17BP1-201ENST00000545713 516 ntBASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRC40Q9H9A6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 ZBED1P1-201ENST00000502364 1930 ntBASIC15.75■□□□□ 0.11
LRRC40Q9H9A6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms