Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 NKILA-202ENST00000614771 2598 ntBASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 ZACNP1-201ENST00000612259 710 ntBASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 AL023803.2-201ENST00000620080 638 ntBASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 AP001002.3-201ENST00000623482 206 ntBASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BCL11BQ9C0K0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 AL122018.1-201ENST00000446607 2310 ntBASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 AC073413.1-201ENST00000603927 732 ntBASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 KRT8P29-201ENST00000420409 1371 ntBASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.04■□□□□ 0.8
BCL11BQ9C0K0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCL11BQ9C0K0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCL11BQ9C0K0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC20.03■□□□□ 0.8
BCL11BQ9C0K0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BCL11BQ9C0K0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BCL11BQ9C0K0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BCL11BQ9C0K0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms