Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 AP002469.2-201ENST00000531724 424 ntBASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 AL031055.1-201ENST00000606362 631 ntBASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SSBP4Q9BWG4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 COL6A4P2-202ENST00000504443 2753 ntBASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 AC136759.1-202ENST00000530858 2194 ntBASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 AC097359.2-201ENST00000604992 2389 ntBASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 HMGA1P7-201ENST00000406908 502 ntBASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 PSAT1P2-201ENST00000426107 972 ntBASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 AL121772.3-201ENST00000610840 674 ntBASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 ACTL9-202ENST00000612068 1252 ntBASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 REXO1L6P-202ENST00000619970 1078 ntBASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSBP4Q9BWG4 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms