Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 FAM86C2P-203ENST00000528684 1004 ntBASIC11.83□□□□□ -0.52
VGLL1Q99990 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.83□□□□□ -0.52
VGLL1Q99990 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.83□□□□□ -0.52
VGLL1Q99990 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
VGLL1Q99990 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.83□□□□□ -0.52
VGLL1Q99990 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.83□□□□□ -0.52
VGLL1Q99990 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VGLL1Q99990 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
VGLL1Q99990 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VGLL1Q99990 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.83□□□□□ -0.52
VGLL1Q99990 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
VGLL1Q99990 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.82□□□□□ -0.52
VGLL1Q99990 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 ZNF259P1-201ENST00000407656 1365 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.82□□□□□ -0.52
VGLL1Q99990 AJ011931.1-201ENST00000618749 2492 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.82□□□□□ -0.52
VGLL1Q99990 AC232323.1-201ENST00000540724 2099 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 REXO1L5P-201ENST00000622260 2098 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.82□□□□□ -0.52
VGLL1Q99990 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.82□□□□□ -0.52
VGLL1Q99990 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
VGLL1Q99990 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 EEF1DP4-201ENST00000446006 880 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 KRT18P3-201ENST00000451602 1288 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.82□□□□□ -0.52
VGLL1Q99990 RN7SL589P-201ENST00000481268 310 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC11.82□□□□□ -0.52
VGLL1Q99990 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.82□□□□□ -0.52
VGLL1Q99990 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.82□□□□□ -0.52
VGLL1Q99990 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.82□□□□□ -0.52
VGLL1Q99990 HNRNPUP1-201ENST00000554987 333 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 AC243562.1-201ENST00000560672 389 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 AP000842.3-202ENST00000569238 1080 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
VGLL1Q99990 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.82□□□□□ -0.52
VGLL1Q99990 AC097359.3-201ENST00000603982 1210 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 AC092902.6-201ENST00000641783 218 ntBASIC11.82□□□□□ -0.52
VGLL1Q99990 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.82□□□□□ -0.52
VGLL1Q99990 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
VGLL1Q99990 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.82□□□□□ -0.52
VGLL1Q99990 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.82□□□□□ -0.52
VGLL1Q99990 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
VGLL1Q99990 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.82□□□□□ -0.52
VGLL1Q99990 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.82□□□□□ -0.52
VGLL1Q99990 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
VGLL1Q99990 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.82□□□□□ -0.52
VGLL1Q99990 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
VGLL1Q99990 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VGLL1Q99990 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
VGLL1Q99990 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms