Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 MIR4313-201ENST00000580760 101 ntBASIC14.22□□□□□ -0.13
SNX18Q96RF0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 AC004835.2-201ENST00000603762 682 ntBASIC14.22□□□□□ -0.13
SNX18Q96RF0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.22□□□□□ -0.13
SNX18Q96RF0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SNX18Q96RF0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.22□□□□□ -0.13
SNX18Q96RF0 CYP4F24P-201ENST00000586049 1580 ntBASIC14.22□□□□□ -0.13
SNX18Q96RF0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 TSEN15P1-201ENST00000423257 515 ntBASIC14.21□□□□□ -0.13
SNX18Q96RF0 PHKG1P2-201ENST00000457537 863 ntBASIC14.21□□□□□ -0.13
SNX18Q96RF0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 KRT8P48-201ENST00000515599 1220 ntBASIC14.21□□□□□ -0.13
SNX18Q96RF0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 AC093028.1-201ENST00000622998 982 ntBASIC14.21□□□□□ -0.13
SNX18Q96RF0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.21□□□□□ -0.13
SNX18Q96RF0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SNX18Q96RF0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNX18Q96RF0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.14
SNX18Q96RF0 AL136982.4-201ENST00000437689 1740 ntBASIC14.21□□□□□ -0.14
SNX18Q96RF0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.21□□□□□ -0.14
SNX18Q96RF0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SNX18Q96RF0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.21□□□□□ -0.14
SNX18Q96RF0 AL365209.1-201ENST00000624418 6473 ntBASIC14.21□□□□□ -0.14
SNX18Q96RF0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms