Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS33AQ96AX1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 AL590627.1-203ENST00000421194 1026 ntBASIC14.96□□□□□ -0.01
VPS33AQ96AX1 MED15P5-201ENST00000423150 992 ntBASIC14.96□□□□□ -0.01
VPS33AQ96AX1 KRT18P3-201ENST00000451602 1288 ntBASIC14.96□□□□□ -0.01
VPS33AQ96AX1 AC079140.1-201ENST00000508039 487 ntBASIC14.96□□□□□ -0.01
VPS33AQ96AX1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 AC026979.3-201ENST00000607315 403 ntBASIC14.96□□□□□ -0.01
VPS33AQ96AX1 AP3S2-216ENST00000617003 1561 ntBASIC14.96□□□□□ -0.01
VPS33AQ96AX1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS33AQ96AX1 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS33AQ96AX1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 AC140479.7-201ENST00000636301 2332 ntBASIC14.95□□□□□ -0.02
VPS33AQ96AX1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 AC023274.1-201ENST00000418278 595 ntBASIC14.95□□□□□ -0.02
VPS33AQ96AX1 AC136604.1-201ENST00000418535 575 ntBASIC14.95□□□□□ -0.02
VPS33AQ96AX1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 SPDYE11-202ENST00000450699 704 ntBASIC14.95□□□□□ -0.02
VPS33AQ96AX1 IGHV3-62-201ENST00000520057 340 ntBASIC14.95□□□□□ -0.02
VPS33AQ96AX1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 SPDYE9P-201ENST00000570642 692 ntBASIC14.95□□□□□ -0.02
VPS33AQ96AX1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 SPDYE10P-202ENST00000612005 668 ntBASIC14.95□□□□□ -0.02
VPS33AQ96AX1 SPDYE8P-202ENST00000612377 668 ntBASIC14.95□□□□□ -0.02
VPS33AQ96AX1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VPS33AQ96AX1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms