Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 FOSL1P1-201ENST00000511041 816 ntBASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 RN7SL850P-201ENST00000579959 291 ntBASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 AC092119.3-201ENST00000612618 583 ntBASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 AC138969.3-201ENST00000546612 1459 ntBASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 AC138932.2-201ENST00000548268 1459 ntBASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 AC126755.4-201ENST00000549796 1459 ntBASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 AC087386.2-201ENST00000623212 4637 ntBASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 AC098859.1-201ENST00000502915 1238 ntBASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 OR7E14P-202ENST00000530490 1290 ntBASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 AL356488.2-201ENST00000602755 427 ntBASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms