Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 TIMM17BP1-201ENST00000545713 516 ntBASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 AC093726.1-201ENST00000608064 963 ntBASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 AC068587.6-202ENST00000641839 5619 ntBASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 AC020658.6-201ENST00000623564 1870 ntBASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 TMEM14DP-201ENST00000422205 345 ntBASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 AC025048.3-201ENST00000590609 569 ntBASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 AC097359.3-201ENST00000603982 1210 ntBASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 AC099568.2-201ENST00000609194 695 ntBASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 AC074044.1-201ENST00000609673 707 ntBASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 AC005702.4-201ENST00000618393 416 ntBASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC33Q8N5R6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 EEF1DP4-201ENST00000446006 880 ntBASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 WFDC1-204ENST00000613603 549 ntBASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 MIR8072-201ENST00000614241 80 ntBASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 MIR6805-201ENST00000615055 62 ntBASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 AC127383.1-201ENST00000444697 1800 ntBASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC33Q8N5R6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms