Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 AC012441.1-201ENST00000446669 685 ntBASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 SNX29P1-201ENST00000548357 1007 ntBASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 PAUPAR-201ENST00000630360 2965 ntBASIC16.32■□□□□ 0.2
SCN4BQ8IWT1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 MIR6775-201ENST00000617557 69 ntBASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 BX539320.1-201ENST00000623759 877 ntBASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.31■□□□□ 0.2
SCN4BQ8IWT1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms