Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 AP001267.2-201ENST00000532619 2086 ntBASIC12.97□□□□□ -0.33
ZNF546Q86UE3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.96□□□□□ -0.33
ZNF546Q86UE3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 AL031133.1-201ENST00000406807 723 ntBASIC12.96□□□□□ -0.33
ZNF546Q86UE3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 AP002383.4-201ENST00000442518 975 ntBASIC12.96□□□□□ -0.33
ZNF546Q86UE3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 MIR5100-201ENST00000579544 119 ntBASIC12.96□□□□□ -0.33
ZNF546Q86UE3 RN7SL850P-201ENST00000579959 291 ntBASIC12.96□□□□□ -0.33
ZNF546Q86UE3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 AC099336.1-202ENST00000602961 463 ntBASIC12.96□□□□□ -0.33
ZNF546Q86UE3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZNF546Q86UE3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 AP005117.1-201ENST00000584346 1413 ntBASIC12.96□□□□□ -0.34
ZNF546Q86UE3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
ZNF546Q86UE3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 AP000867.3-201ENST00000524675 377 ntBASIC12.95□□□□□ -0.34
ZNF546Q86UE3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ZNF546Q86UE3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms