Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 AC074044.1-201ENST00000609673 707 ntBASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 AL109936.8-201ENST00000641772 604 ntBASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NHLRC1Q6VVB1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 C18orf15-201ENST00000623680 2534 ntBASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 SLED1-202ENST00000512051 380 ntBASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.98□□□□□ -0.17
NHLRC1Q6VVB1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 FLJ16779-201ENST00000612722 7638 ntBASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 MRPS18AP1-201ENST00000414458 589 ntBASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 AC015922.1-201ENST00000421102 1152 ntBASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms