Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 AP006288.1-201ENST00000446065 395 ntBASIC13.65□□□□□ -0.22
C11orf88Q6PI97 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf88Q6PI97 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
C11orf88Q6PI97 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
C11orf88Q6PI97 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 PI4KAP1-204ENST00000612579 1703 ntBASIC13.64□□□□□ -0.23
C11orf88Q6PI97 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 AL390755.1-201ENST00000623716 2027 ntBASIC13.64□□□□□ -0.23
C11orf88Q6PI97 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.64□□□□□ -0.23
C11orf88Q6PI97 C20orf181-201ENST00000623918 480 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms