Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL10A1Q03692 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
COL10A1Q03692 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL10A1Q03692 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.16□□□□□ -0.3
COL10A1Q03692 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
COL10A1Q03692 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL10A1Q03692 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COL10A1Q03692 Z97205.2-201ENST00000564697 1639 ntBASIC13.16□□□□□ -0.3
COL10A1Q03692 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.16□□□□□ -0.3
COL10A1Q03692 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
COL10A1Q03692 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.16□□□□□ -0.3
COL10A1Q03692 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
COL10A1Q03692 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL10A1Q03692 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL10A1Q03692 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
COL10A1Q03692 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COL10A1Q03692 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COL10A1Q03692 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.15□□□□□ -0.3
COL10A1Q03692 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 C18orf15-201ENST00000623680 2534 ntBASIC13.15□□□□□ -0.3
COL10A1Q03692 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 AC100757.3-201ENST00000622361 1406 ntBASIC13.15□□□□□ -0.3
COL10A1Q03692 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.15□□□□□ -0.3
COL10A1Q03692 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
COL10A1Q03692 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.15□□□□□ -0.3
COL10A1Q03692 AC074338.1-201ENST00000416825 156 ntBASIC13.15□□□□□ -0.3
COL10A1Q03692 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.15□□□□□ -0.3
COL10A1Q03692 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.15□□□□□ -0.3
COL10A1Q03692 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 SLED1-202ENST00000512051 380 ntBASIC13.15□□□□□ -0.3
COL10A1Q03692 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.15□□□□□ -0.3
COL10A1Q03692 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
COL10A1Q03692 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.15□□□□□ -0.3
COL10A1Q03692 AL109936.8-201ENST00000641772 604 ntBASIC13.15□□□□□ -0.3
COL10A1Q03692 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
COL10A1Q03692 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
COL10A1Q03692 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
COL10A1Q03692 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.15□□□□□ -0.3
COL10A1Q03692 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
COL10A1Q03692 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.15□□□□□ -0.3
COL10A1Q03692 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.15□□□□□ -0.3
COL10A1Q03692 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COL10A1Q03692 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
COL10A1Q03692 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
COL10A1Q03692 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.15□□□□□ -0.31
COL10A1Q03692 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
COL10A1Q03692 AC087499.5-201ENST00000452760 1342 ntBASIC13.14□□□□□ -0.31
COL10A1Q03692 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL10A1Q03692 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.14□□□□□ -0.31
COL10A1Q03692 AC112693.3-201ENST00000624819 1983 ntBASIC13.14□□□□□ -0.31
COL10A1Q03692 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.14□□□□□ -0.31
COL10A1Q03692 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COL10A1Q03692 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
COL10A1Q03692 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
COL10A1Q03692 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.14□□□□□ -0.31
COL10A1Q03692 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
COL10A1Q03692 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL10A1Q03692 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
COL10A1Q03692 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL10A1Q03692 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.14□□□□□ -0.31
COL10A1Q03692 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL10A1Q03692 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.14□□□□□ -0.31
COL10A1Q03692 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COL10A1Q03692 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.14□□□□□ -0.31
COL10A1Q03692 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.14□□□□□ -0.31
COL10A1Q03692 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.14□□□□□ -0.31
COL10A1Q03692 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms