Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 RPS2P55-201ENST00000397318 883 ntBASIC16.23■□□□□ 0.19
CBX1P83916 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.23■□□□□ 0.19
CBX1P83916 AC107956.1-201ENST00000494359 873 ntBASIC16.23■□□□□ 0.19
CBX1P83916 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 AP001412.1-201ENST00000608405 714 ntBASIC16.23■□□□□ 0.19
CBX1P83916 AC026471.5-201ENST00000615068 467 ntBASIC16.23■□□□□ 0.19
CBX1P83916 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.23■□□□□ 0.19
CBX1P83916 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 AC023794.5-201ENST00000564380 2157 ntBASIC16.23■□□□□ 0.19
CBX1P83916 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX1P83916 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX1P83916 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.22■□□□□ 0.19
CBX1P83916 AC016397.2-201ENST00000624848 1985 ntBASIC16.22■□□□□ 0.19
CBX1P83916 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
CBX1P83916 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CBX1P83916 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 FAM201B-201ENST00000458407 597 ntBASIC16.22■□□□□ 0.19
CBX1P83916 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX1P83916 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.22■□□□□ 0.19
CBX1P83916 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.22■□□□□ 0.19
CBX1P83916 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX1P83916 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX1P83916 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CBX1P83916 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CBX1P83916 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.22■□□□□ 0.19
CBX1P83916 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CBX1P83916 AC131009.4-201ENST00000624048 1740 ntBASIC16.22■□□□□ 0.19
CBX1P83916 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CBX1P83916 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CBX1P83916 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC16.21■□□□□ 0.19
CBX1P83916 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 AP002761.4-201ENST00000565433 3361 ntBASIC16.21■□□□□ 0.19
CBX1P83916 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 UNC93B2-201ENST00000285383 730 ntBASIC16.21■□□□□ 0.19
CBX1P83916 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CBX1P83916 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.21■□□□□ 0.19
CBX1P83916 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CBX1P83916 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.21■□□□□ 0.19
CBX1P83916 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CBX1P83916 AL445209.1-201ENST00000607269 3491 ntBASIC16.21■□□□□ 0.19
CBX1P83916 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.21■□□□□ 0.19
CBX1P83916 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.21■□□□□ 0.19
CBX1P83916 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.21■□□□□ 0.19
CBX1P83916 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms