Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 C18orf15-201ENST00000623680 2534 ntBASIC10.99□□□□□ -0.65
CKS1BP61024 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC10.99□□□□□ -0.65
CKS1BP61024 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC10.99□□□□□ -0.65
CKS1BP61024 CDC14C-201ENST00000428251 1719 ntBASIC10.99□□□□□ -0.65
CKS1BP61024 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC10.99□□□□□ -0.65
CKS1BP61024 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC10.99□□□□□ -0.65
CKS1BP61024 HCG4-201ENST00000418983 998 ntBASIC10.99□□□□□ -0.65
CKS1BP61024 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC10.99□□□□□ -0.65
CKS1BP61024 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 MPI-205ENST00000562606 1052 ntTSL 3 BASIC10.99□□□□□ -0.65
CKS1BP61024 AC005412.3-201ENST00000580309 715 ntBASIC10.99□□□□□ -0.65
CKS1BP61024 AP001269.4-201ENST00000609611 512 ntBASIC10.99□□□□□ -0.65
CKS1BP61024 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC10.99□□□□□ -0.65
CKS1BP61024 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC10.99□□□□□ -0.65
CKS1BP61024 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
CKS1BP61024 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
CKS1BP61024 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.99□□□□□ -0.65
CKS1BP61024 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC10.99□□□□□ -0.65
CKS1BP61024 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CKS1BP61024 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.99□□□□□ -0.65
CKS1BP61024 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
CKS1BP61024 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.99□□□□□ -0.65
CKS1BP61024 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CKS1BP61024 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC10.98□□□□□ -0.65
CKS1BP61024 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC10.98□□□□□ -0.65
CKS1BP61024 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CKS1BP61024 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS1BP61024 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
CKS1BP61024 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS1BP61024 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 SCARNA2-201ENST00000458748 420 ntBASIC10.98□□□□□ -0.65
CKS1BP61024 AC106795.1-205ENST00000512851 1056 ntBASIC10.98□□□□□ -0.65
CKS1BP61024 KRT18P21-201ENST00000515767 1272 ntBASIC10.98□□□□□ -0.65
CKS1BP61024 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS1BP61024 MTDHP3-201ENST00000594186 672 ntBASIC10.98□□□□□ -0.65
CKS1BP61024 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC10.98□□□□□ -0.65
CKS1BP61024 BSG-214ENST00000614867 960 ntTSL 3 BASIC10.98□□□□□ -0.65
CKS1BP61024 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CKS1BP61024 AP000550.4-202ENST00000639755 178 ntBASIC10.98□□□□□ -0.65
CKS1BP61024 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS1BP61024 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS1BP61024 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS1BP61024 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CKS1BP61024 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC10.98□□□□□ -0.65
CKS1BP61024 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC10.98□□□□□ -0.65
CKS1BP61024 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
CKS1BP61024 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms