Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.38□□□□□ -0.27
AP3S2P59780 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
AP3S2P59780 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 MTHFR-210ENST00000641407 2387 ntBASIC13.37□□□□□ -0.27
AP3S2P59780 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
AP3S2P59780 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.37□□□□□ -0.27
AP3S2P59780 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.37□□□□□ -0.27
AP3S2P59780 KRT18P31-201ENST00000506277 1292 ntBASIC13.37□□□□□ -0.27
AP3S2P59780 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.37□□□□□ -0.27
AP3S2P59780 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.37□□□□□ -0.27
AP3S2P59780 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.37□□□□□ -0.27
AP3S2P59780 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
AP3S2P59780 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 AL645728.2-201ENST00000641974 660 ntBASIC13.37□□□□□ -0.27
AP3S2P59780 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.37□□□□□ -0.27
AP3S2P59780 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
AP3S2P59780 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.37□□□□□ -0.27
AP3S2P59780 AL691432.1-201ENST00000596308 1422 ntBASIC13.37□□□□□ -0.27
AP3S2P59780 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
AP3S2P59780 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.37□□□□□ -0.27
AP3S2P59780 MIR193BHG-211ENST00000641433 5365 ntBASIC13.37□□□□□ -0.27
AP3S2P59780 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
AP3S2P59780 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.37□□□□□ -0.27
AP3S2P59780 BNIP3P1-202ENST00000550043 1585 ntBASIC13.37□□□□□ -0.27
AP3S2P59780 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AP3S2P59780 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
AP3S2P59780 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.36□□□□□ -0.27
AP3S2P59780 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.36□□□□□ -0.27
AP3S2P59780 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
AP3S2P59780 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.36□□□□□ -0.27
AP3S2P59780 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.36□□□□□ -0.27
AP3S2P59780 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.36□□□□□ -0.27
AP3S2P59780 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 HMGA1P7-201ENST00000406908 502 ntBASIC13.36□□□□□ -0.27
AP3S2P59780 AP000867.3-201ENST00000524675 377 ntBASIC13.36□□□□□ -0.27
AP3S2P59780 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.36□□□□□ -0.27
AP3S2P59780 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.36□□□□□ -0.27
AP3S2P59780 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.36□□□□□ -0.27
AP3S2P59780 AL450472.2-201ENST00000603663 1156 ntBASIC13.36□□□□□ -0.27
AP3S2P59780 AC069148.1-201ENST00000608741 768 ntBASIC13.36□□□□□ -0.27
AP3S2P59780 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.36□□□□□ -0.27
AP3S2P59780 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.36□□□□□ -0.27
AP3S2P59780 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms