Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH11P55287 AC107890.1-201ENST00000422478 521 ntBASIC14.29□□□□□ -0.12
CDH11P55287 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH11P55287 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH11P55287 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH11P55287 ALG1L8P-201ENST00000533887 760 ntBASIC14.29□□□□□ -0.12
CDH11P55287 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH11P55287 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH11P55287 DUX4L27-201ENST00000554796 1261 ntBASIC14.29□□□□□ -0.12
CDH11P55287 LINC02084-201ENST00000606069 1096 ntBASIC14.29□□□□□ -0.12
CDH11P55287 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH11P55287 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH11P55287 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH11P55287 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 MROH4P-201ENST00000431302 1578 ntBASIC14.29□□□□□ -0.12
CDH11P55287 BNIP3P1-202ENST00000550043 1585 ntBASIC14.29□□□□□ -0.12
CDH11P55287 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDH11P55287 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH11P55287 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDH11P55287 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH11P55287 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDH11P55287 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH11P55287 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH11P55287 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH11P55287 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CDH11P55287 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH11P55287 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 MIR943-201ENST00000401286 94 ntBASIC14.28□□□□□ -0.12
CDH11P55287 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.28□□□□□ -0.12
CDH11P55287 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH11P55287 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDH11P55287 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH11P55287 BCRP1-201ENST00000444246 691 ntBASIC14.28□□□□□ -0.12
CDH11P55287 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH11P55287 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 IGHV3-42-201ENST00000520410 361 ntBASIC14.28□□□□□ -0.12
CDH11P55287 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH11P55287 AC105233.2-201ENST00000523697 349 ntBASIC14.28□□□□□ -0.12
CDH11P55287 AF228730.5-201ENST00000530288 346 ntBASIC14.28□□□□□ -0.12
CDH11P55287 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH11P55287 AC051619.7-201ENST00000568314 623 ntBASIC14.28□□□□□ -0.12
CDH11P55287 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.28□□□□□ -0.12
CDH11P55287 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH11P55287 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDH11P55287 AL691432.1-201ENST00000596308 1422 ntBASIC14.28□□□□□ -0.12
CDH11P55287 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH11P55287 AC005089.1-201ENST00000619486 2241 ntBASIC14.28□□□□□ -0.12
CDH11P55287 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 AC084121.4-201ENST00000641598 221 ntBASIC14.28□□□□□ -0.12
CDH11P55287 AF228730.8-201ENST00000642140 221 ntBASIC14.28□□□□□ -0.12
CDH11P55287 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CDH11P55287 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CDH11P55287 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CDH11P55287 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH11P55287 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDH11P55287 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH11P55287 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH11P55287 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CDH11P55287 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CDH11P55287 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.27□□□□□ -0.12
CDH11P55287 AC232323.1-201ENST00000540724 2099 ntBASIC14.27□□□□□ -0.12
CDH11P55287 REXO1L5P-201ENST00000622260 2098 ntBASIC14.27□□□□□ -0.12
CDH11P55287 AL390755.1-201ENST00000623716 2027 ntBASIC14.27□□□□□ -0.12
CDH11P55287 AC023024.2-201ENST00000623561 1993 ntBASIC14.27□□□□□ -0.12
CDH11P55287 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CDH11P55287 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.27□□□□□ -0.12
CDH11P55287 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDH11P55287 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDH11P55287 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms