Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NEK3P51956 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEK3P51956 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NEK3P51956 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 AC026748.1-201ENST00000624349 3251 ntBASIC16.02■□□□□ 0.16
NEK3P51956 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 AC134407.2-201ENST00000625089 1978 ntBASIC16.02■□□□□ 0.16
NEK3P51956 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.02■□□□□ 0.16
NEK3P51956 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.02■□□□□ 0.16
NEK3P51956 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.02■□□□□ 0.16
NEK3P51956 AC087499.6-201ENST00000411576 835 ntBASIC16.02■□□□□ 0.16
NEK3P51956 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.02■□□□□ 0.16
NEK3P51956 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.02■□□□□ 0.16
NEK3P51956 TPRX2P-201ENST00000535362 881 ntBASIC16.02■□□□□ 0.16
NEK3P51956 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.02■□□□□ 0.16
NEK3P51956 AC140912.1-201ENST00000577171 1054 ntBASIC16.02■□□□□ 0.16
NEK3P51956 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NEK3P51956 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NEK3P51956 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.02■□□□□ 0.16
NEK3P51956 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.02■□□□□ 0.16
NEK3P51956 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
NEK3P51956 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.02■□□□□ 0.15
NEK3P51956 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.02■□□□□ 0.15
NEK3P51956 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NEK3P51956 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NEK3P51956 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NEK3P51956 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NEK3P51956 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NEK3P51956 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NEK3P51956 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NEK3P51956 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NEK3P51956 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
NEK3P51956 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
NEK3P51956 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NEK3P51956 CICP23-201ENST00000605013 2741 ntBASIC16.02■□□□□ 0.15
NEK3P51956 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NEK3P51956 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.02■□□□□ 0.15
NEK3P51956 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
NEK3P51956 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
NEK3P51956 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 MEP1AP4-201ENST00000423244 1087 ntBASIC16.01■□□□□ 0.15
NEK3P51956 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.01■□□□□ 0.15
NEK3P51956 AP005018.1-201ENST00000525475 301 ntBASIC16.01■□□□□ 0.15
NEK3P51956 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 AC055876.2-201ENST00000531834 546 ntBASIC16.01■□□□□ 0.15
NEK3P51956 API5-211ENST00000534695 560 ntTSL 5 BASIC16.01■□□□□ 0.15
NEK3P51956 TIMM17BP1-201ENST00000545713 516 ntBASIC16.01■□□□□ 0.15
NEK3P51956 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
NEK3P51956 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 AC092337.1-201ENST00000568699 1129 ntBASIC16.01■□□□□ 0.15
NEK3P51956 TP53TG3HP-202ENST00000569755 579 ntBASIC16.01■□□□□ 0.15
NEK3P51956 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.01■□□□□ 0.15
NEK3P51956 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
NEK3P51956 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NEK3P51956 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.01■□□□□ 0.15
NEK3P51956 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.01■□□□□ 0.15
NEK3P51956 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms