Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 WASH3P-207ENST00000560956 1394 ntBASIC15.39■□□□□ 0.05
HMGCLP35914 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGCLP35914 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.39■□□□□ 0.05
HMGCLP35914 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.39■□□□□ 0.05
HMGCLP35914 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGCLP35914 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
HMGCLP35914 DGCR5-201ENST00000399539 862 ntBASIC15.39■□□□□ 0.05
HMGCLP35914 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HMGCLP35914 SOCS2P1-201ENST00000417727 557 ntBASIC15.39■□□□□ 0.05
HMGCLP35914 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.39■□□□□ 0.05
HMGCLP35914 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.39■□□□□ 0.05
HMGCLP35914 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HMGCLP35914 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.39■□□□□ 0.05
HMGCLP35914 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.39■□□□□ 0.05
HMGCLP35914 WASH4P-201ENST00000564273 1246 ntBASIC15.39■□□□□ 0.05
HMGCLP35914 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.39■□□□□ 0.05
HMGCLP35914 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 KRT8P22-201ENST00000562317 1415 ntBASIC15.39■□□□□ 0.05
HMGCLP35914 AC007787.1-201ENST00000588095 1583 ntBASIC15.39■□□□□ 0.05
HMGCLP35914 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGCLP35914 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.39■□□□□ 0.05
HMGCLP35914 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
HMGCLP35914 AC093525.8-201ENST00000624099 1342 ntBASIC15.39■□□□□ 0.05
HMGCLP35914 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.39■□□□□ 0.05
HMGCLP35914 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.39■□□□□ 0.05
HMGCLP35914 AC012508.2-201ENST00000567613 1472 ntBASIC15.39■□□□□ 0.05
HMGCLP35914 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.39■□□□□ 0.05
HMGCLP35914 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMGCLP35914 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGCLP35914 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HMGCLP35914 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HMGCLP35914 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.38■□□□□ 0.05
HMGCLP35914 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.38■□□□□ 0.05
HMGCLP35914 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGCLP35914 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGCLP35914 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.38■□□□□ 0.05
HMGCLP35914 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 AL645937.2-201ENST00000396808 931 ntBASIC15.38■□□□□ 0.05
HMGCLP35914 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.38■□□□□ 0.05
HMGCLP35914 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.38■□□□□ 0.05
HMGCLP35914 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.38■□□□□ 0.05
HMGCLP35914 ENPP7P5-201ENST00000541031 1031 ntBASIC15.38■□□□□ 0.05
HMGCLP35914 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 WFDC1-204ENST00000613603 549 ntBASIC15.38■□□□□ 0.05
HMGCLP35914 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HMGCLP35914 REXO1L4P-201ENST00000605109 1937 ntBASIC15.38■□□□□ 0.05
HMGCLP35914 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HMGCLP35914 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HMGCLP35914 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HMGCLP35914 AC091951.1-201ENST00000512854 2465 ntBASIC15.38■□□□□ 0.05
HMGCLP35914 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HMGCLP35914 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.38■□□□□ 0.05
HMGCLP35914 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HMGCLP35914 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.38■□□□□ 0.05
HMGCLP35914 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HMGCLP35914 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGCLP35914 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGCLP35914 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HMGCLP35914 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGCLP35914 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGCLP35914 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HMGCLP35914 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms