Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX11P35716 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.29■□□□□ 0.04
SOX11P35716 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX11P35716 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX11P35716 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.29■□□□□ 0.04
SOX11P35716 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SOX11P35716 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SOX11P35716 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX11P35716 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX11P35716 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX11P35716 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX11P35716 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SOX11P35716 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SOX11P35716 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.28■□□□□ 0.04
SOX11P35716 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SOX11P35716 ANKRD19P-201ENST00000338192 862 ntBASIC15.28■□□□□ 0.04
SOX11P35716 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SOX11P35716 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 HAUS4P1-201ENST00000406739 1145 ntBASIC15.28■□□□□ 0.04
SOX11P35716 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 INGX-202ENST00000489074 768 ntBASIC15.28■□□□□ 0.04
SOX11P35716 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 HNRNPA1P23-201ENST00000491091 1133 ntBASIC15.28■□□□□ 0.04
SOX11P35716 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.28■□□□□ 0.04
SOX11P35716 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.28■□□□□ 0.04
SOX11P35716 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SOX11P35716 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX11P35716 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX11P35716 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.27■□□□□ 0.04
SOX11P35716 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.27■□□□□ 0.04
SOX11P35716 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.27■□□□□ 0.04
SOX11P35716 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.27■□□□□ 0.04
SOX11P35716 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SOX11P35716 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SOX11P35716 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.27■□□□□ 0.04
SOX11P35716 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SOX11P35716 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.27■□□□□ 0.04
SOX11P35716 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.27■□□□□ 0.04
SOX11P35716 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SOX11P35716 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SOX11P35716 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.27■□□□□ 0.04
SOX11P35716 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.27■□□□□ 0.04
SOX11P35716 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.27■□□□□ 0.04
SOX11P35716 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.27■□□□□ 0.04
SOX11P35716 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.27■□□□□ 0.04
SOX11P35716 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 PRYP6-201ENST00000514804 343 ntBASIC15.27■□□□□ 0.04
SOX11P35716 RARRES2P9-201ENST00000565168 469 ntBASIC15.27■□□□□ 0.04
SOX11P35716 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.27■□□□□ 0.04
SOX11P35716 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.27■□□□□ 0.04
SOX11P35716 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SOX11P35716 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SOX11P35716 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.27■□□□□ 0.03
SOX11P35716 AC099063.4-201ENST00000641099 1602 ntBASIC15.27■□□□□ 0.03
SOX11P35716 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SOX11P35716 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SOX11P35716 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms