Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.76□□□□□ -0.05
RORAP35398 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.76□□□□□ -0.05
RORAP35398 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 AC005252.2-201ENST00000624630 1141 ntBASIC14.76□□□□□ -0.05
RORAP35398 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.76□□□□□ -0.05
RORAP35398 COX11-210ENST00000639671 696 ntBASIC14.76□□□□□ -0.05
RORAP35398 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 AC067930.6-201ENST00000623257 4947 ntBASIC14.76□□□□□ -0.05
RORAP35398 AP003680.1-201ENST00000598970 3660 ntBASIC14.76□□□□□ -0.05
RORAP35398 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.76□□□□□ -0.05
RORAP35398 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RORAP35398 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 AP005117.1-202ENST00000581724 1908 ntBASIC14.76□□□□□ -0.05
RORAP35398 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.76□□□□□ -0.05
RORAP35398 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RORAP35398 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.75□□□□□ -0.05
RORAP35398 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.75□□□□□ -0.05
RORAP35398 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.75□□□□□ -0.05
RORAP35398 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.75□□□□□ -0.05
RORAP35398 AC099063.4-201ENST00000641099 1602 ntBASIC14.75□□□□□ -0.05
RORAP35398 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.75□□□□□ -0.05
RORAP35398 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 AC005229.1-201ENST00000392885 409 ntBASIC14.75□□□□□ -0.05
RORAP35398 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.75□□□□□ -0.05
RORAP35398 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.75□□□□□ -0.05
RORAP35398 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.75□□□□□ -0.05
RORAP35398 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.75□□□□□ -0.05
RORAP35398 AP001889.1-201ENST00000525414 633 ntBASIC14.75□□□□□ -0.05
RORAP35398 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.75□□□□□ -0.05
RORAP35398 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 AC009486.1-201ENST00000569860 813 ntBASIC14.75□□□□□ -0.05
RORAP35398 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.75□□□□□ -0.05
RORAP35398 AL022328.1-201ENST00000610050 478 ntBASIC14.75□□□□□ -0.05
RORAP35398 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.75□□□□□ -0.05
RORAP35398 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.75□□□□□ -0.05
RORAP35398 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.75□□□□□ -0.05
RORAP35398 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
RORAP35398 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.75□□□□□ -0.05
RORAP35398 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RORAP35398 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.74□□□□□ -0.05
RORAP35398 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.74□□□□□ -0.05
RORAP35398 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.74□□□□□ -0.05
RORAP35398 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.74□□□□□ -0.05
RORAP35398 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.74□□□□□ -0.05
RORAP35398 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.74□□□□□ -0.05
RORAP35398 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.74□□□□□ -0.05
RORAP35398 KRT223P-202ENST00000449164 1292 ntBASIC14.74□□□□□ -0.05
RORAP35398 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RORAP35398 AC104989.1-201ENST00000519711 778 ntBASIC14.74□□□□□ -0.05
RORAP35398 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.74□□□□□ -0.05
RORAP35398 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.74□□□□□ -0.05
RORAP35398 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.74□□□□□ -0.05
RORAP35398 AP001063.1-201ENST00000568332 529 ntBASIC14.74□□□□□ -0.05
RORAP35398 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RORAP35398 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RORAP35398 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.74□□□□□ -0.05
RORAP35398 AC133552.6-201ENST00000613406 534 ntBASIC14.74□□□□□ -0.05
RORAP35398 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.74□□□□□ -0.05
RORAP35398 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RORAP35398 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms