Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC026979.3-201ENST00000607315 403 ntBASIC13.67□□□□□ -0.22
ATF1P18846 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ATF1P18846 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.67□□□□□ -0.22
ATF1P18846 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATF1P18846 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
ATF1P18846 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 AC027601.5-201ENST00000624065 2482 ntBASIC13.66□□□□□ -0.22
ATF1P18846 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 OR2I1P-209ENST00000641730 5365 ntBASIC13.66□□□□□ -0.22
ATF1P18846 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ATF1P18846 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
ATF1P18846 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.66□□□□□ -0.22
ATF1P18846 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.66□□□□□ -0.22
ATF1P18846 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.66□□□□□ -0.22
ATF1P18846 AC040169.1-201ENST00000565382 521 ntBASIC13.66□□□□□ -0.22
ATF1P18846 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 AL121894.2-201ENST00000602977 491 ntBASIC13.66□□□□□ -0.22
ATF1P18846 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 WASH3P-207ENST00000560956 1394 ntBASIC13.66□□□□□ -0.22
ATF1P18846 FO538757.1-201ENST00000623083 1397 ntBASIC13.66□□□□□ -0.22
ATF1P18846 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.66□□□□□ -0.22
ATF1P18846 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.66□□□□□ -0.22
ATF1P18846 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATF1P18846 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ATF1P18846 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ATF1P18846 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.65□□□□□ -0.22
ATF1P18846 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.65□□□□□ -0.22
ATF1P18846 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
ATF1P18846 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ATF1P18846 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ATF1P18846 YBX2P1-201ENST00000394192 760 ntBASIC13.65□□□□□ -0.22
ATF1P18846 MCCD1P2-201ENST00000423228 335 ntBASIC13.65□□□□□ -0.22
ATF1P18846 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.65□□□□□ -0.22
ATF1P18846 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.65□□□□□ -0.22
ATF1P18846 TIMM8BP1-201ENST00000452384 211 ntBASIC13.65□□□□□ -0.22
ATF1P18846 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.65□□□□□ -0.22
ATF1P18846 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.65□□□□□ -0.22
ATF1P18846 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms